WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK256.1c.1 Sequence Name  ZK256.1c.1
Length (nt)  2937   Chromosome Location  I: 13011462-13023292
Chromosome . Primary Identifier  I Chromosome Location . Start  13011462
Chromosome Location . End  13023292 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK256.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004063 pmr-1 ZK256.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK256.1c ZK256.1c 2937   I: 13011462-13011500

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK256.1c.1 13011462 13023292 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33358   39   I: 13011462-13011500 Caenorhabditis elegans
Exon33361   105   I: 13011591-13011695 Caenorhabditis elegans
Exon33365   399   I: 13012133-13012531 Caenorhabditis elegans
Exon33373   231   I: 13013377-13013607 Caenorhabditis elegans
Exon33378   276   I: 13013670-13013945 Caenorhabditis elegans
Exon33383   574   I: 13015161-13015734 Caenorhabditis elegans
Exon33388   303   I: 13019187-13019489 Caenorhabditis elegans
Exon33393   385   I: 13020257-13020641 Caenorhabditis elegans
Exon33398   265   I: 13021486-13021750 Caenorhabditis elegans
Exon33402   241   I: 13022388-13022628 Caenorhabditis elegans
Exon33403   119   I: 13023174-13023292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK256.1c.1 13011462 13023292 1

1 Sequence

Length
2937

1 Sequence Ontology Term

Identifier Name Description
transcript