WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK256.1b.1 Sequence Name  ZK256.1b.1
Length (nt)  2192   Chromosome Location  I: 13012220-13021005
Chromosome . Primary Identifier  I Chromosome Location . Start  13012220
Chromosome Location . End  13021005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK256.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004063 pmr-1 ZK256.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK256.1b ZK256.1b 2118   I: 13012220-13012531

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK256.1b.1 13012220 13021005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33366   312   I: 13012220-13012531 Caenorhabditis elegans
Exon33372   231   I: 13013377-13013607 Caenorhabditis elegans
Exon33377   276   I: 13013670-13013945 Caenorhabditis elegans
Exon33382   574   I: 13015161-13015734 Caenorhabditis elegans
Exon33387   303   I: 13019187-13019489 Caenorhabditis elegans
Exon33392   385   I: 13020257-13020641 Caenorhabditis elegans
Exon33394   111   I: 13020895-13021005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK256.1b.1 13012220 13021005 1

1 Sequence

Length
2192

1 Sequence Ontology Term

Identifier Name Description
transcript