WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E5.5b.1 Sequence Name  M01E5.5b.1
Length (nt)  3016   Chromosome Location  I: 13292506-13297558
Chromosome . Primary Identifier  I Chromosome Location . Start  13292506
Chromosome Location . End  13297558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E5.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006595 top-1 M01E5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E5.5b M01E5.5b 2205   I: 13292626-13293024

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E5.5b.1 13292506 13297558 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33980   519   I: 13292506-13293024 Caenorhabditis elegans
Exon33984   1482   I: 13294235-13295716 Caenorhabditis elegans
Exon33986   243   I: 13295766-13296008 Caenorhabditis elegans
Exon33988   772   I: 13296787-13297558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E5.5b.1 13292506 13297558 1

1 Sequence

Length
3016

1 Sequence Ontology Term

Identifier Name Description
transcript