WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M01E5.5b Sequence Name  M01E5.5b
Length (nt)  2205   Chromosome Location  I: 13292626-13293024
Chromosome . Primary Identifier  I Chromosome Location . Start  13292626
Chromosome Location . End  13293024
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E5.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12284 TOP-1, isoform b 85.1 734 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00034359
WBRNAi00070270
WBRNAi00025977
WBRNAi00050763
WBRNAi00025978
WBRNAi00000085
WBRNAi00108013
WBRNAi00108139
WBRNAi00063504
WBRNAi00090817
WBRNAi00071072
WBRNAi00116546
WBRNAi00088906
WBRNAi00061562
WBRNAi00062043
WBRNAi00062044
WBRNAi00108012
WBRNAi00081661
WBRNAi00070268
WBRNAi00070267
WBRNAi00070269
WBRNAi00088879
WBRNAi00088863
WBRNAi00088944
WBRNAi00117946

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M01E5.5b 13292626 13293024 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006595 top-1 M01E5.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:M01E5.5b 13292626 13293024 1
CDS:M01E5.5b 13294235 13295716 1
CDS:M01E5.5b 13295766 13296008 1
CDS:M01E5.5b 13296787 13296867 1

1 Sequence

Length
2205

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M01E5.5b.1 M01E5.5b.1 3016   I: 13292506-13297558