WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G10A.2a.1 Sequence Name  Y48G10A.2a.1
Length (nt)  1377   Chromosome Location  I: 13477152-13487368
Chromosome . Primary Identifier  I Chromosome Location . Start  13477152
Chromosome Location . End  13487368 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G10A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013019 Y48G10A.2 Y48G10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G10A.2a Y48G10A.2a 1128   I: 13477401-13477416

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.2a.1 13477152 13487368 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34282   265   I: 13477152-13477416 Caenorhabditis elegans
Exon34284   182   I: 13480032-13480213 Caenorhabditis elegans
Exon34286   206   I: 13482028-13482233 Caenorhabditis elegans
Exon34288   94   I: 13482289-13482382 Caenorhabditis elegans
Exon34290   147   I: 13484107-13484253 Caenorhabditis elegans
Exon34293   132   I: 13484308-13484439 Caenorhabditis elegans
Exon34294   347   I: 13486964-13487310 Caenorhabditis elegans
Exon34295   4   I: 13487365-13487368 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.2a.1 13477152 13487368 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript