WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G10A.2a Sequence Name  Y48G10A.2a
Length (nt)  1128   Chromosome Location  I: 13477401-13477416
Chromosome . Primary Identifier  I Chromosome Location . Start  13477401
Chromosome Location . End  13477416
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G10A.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25313 Y48G10A.2, isoform a 42.3 375 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056930
WBRNAi00004674
WBRNAi00037261

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G10A.2a 13477401 13477416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013019 Y48G10A.2 Y48G10A.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G10A.2a 13477401 13477416 -1
CDS:Y48G10A.2a 13480032 13480213 -1
CDS:Y48G10A.2a 13482028 13482233 -1
CDS:Y48G10A.2a 13482289 13482382 -1
CDS:Y48G10A.2a 13484107 13484253 -1
CDS:Y48G10A.2a 13484308 13484439 -1
CDS:Y48G10A.2a 13486964 13487310 -1
CDS:Y48G10A.2a 13487365 13487368 -1

1 Sequence

Length
1128

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G10A.2a.1 Y48G10A.2a.1 1377   I: 13477152-13487368