WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y6B3A.1a Sequence Name  Y6B3A.1a
Length (nt)  4785   Chromosome Location  I: 13604237-13604396
Chromosome . Primary Identifier  I Chromosome Location . Start  13604237
Chromosome Location . End  13604396
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3A.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42203 AGEF-1, isoform a 179.2 1594 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00004851
WBRNAi00026986
WBRNAi00026987
WBRNAi00094155
WBRNAi00004777
WBRNAi00071687
WBRNAi00083359
WBRNAi00085819
WBRNAi00087676
WBRNAi00071078
WBRNAi00076840
WBRNAi00060661
WBRNAi00060662
WBRNAi00026918
WBRNAi00026919
WBRNAi00058087
WBRNAi00060659
WBRNAi00060660
WBRNAi00110586
WBRNAi00098431
WBRNAi00004852
WBRNAi00084281
WBRNAi00111760

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y6B3A.1a 13604237 13604396 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012386 agef-1 Y6B3A.1 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y6B3A.1a 13604237 13604396 -1
CDS:Y6B3A.1a 13604674 13604823 -1
CDS:Y6B3A.1a 13604884 13604988 -1
CDS:Y6B3A.1a 13605050 13605328 -1
CDS:Y6B3A.1a 13605573 13605771 -1
CDS:Y6B3A.1a 13605821 13605956 -1
CDS:Y6B3A.1a 13606396 13606690 -1
CDS:Y6B3A.1a 13607639 13607970 -1
CDS:Y6B3A.1a 13608910 13609355 -1
CDS:Y6B3A.1a 13616280 13616743 -1
CDS:Y6B3A.1a 13617795 13618194 -1
CDS:Y6B3A.1a 13619613 13619966 -1
CDS:Y6B3A.1a 13620602 13620702 -1
CDS:Y6B3A.1a 13620996 13621152 -1
CDS:Y6B3A.1a 13622103 13622598 -1
CDS:Y6B3A.1a 13623427 13623540 -1
CDS:Y6B3A.1a 13623596 13623736 -1
CDS:Y6B3A.1a 13624797 13625113 -1
CDS:Y6B3A.1a 13626060 13626198 -1

1 Sequence

Length
4785

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y6B3A.1a.1 Y6B3A.1a.1 5143   I: 13603906-13626225