WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00003416 Gene Name  mars-2
Sequence Name  ? Y105E8A.20 Brief Description  mrs-2 encodes a predicted mitochondrial methionyl-tRNA synthetase (MetRS), a class I aminoacyl-tRNA synthetase that catalyzes the attachment of methionine to its cognate tRNA and is thus required for protein biosynthesis; MRS-2 is required for embryonic, germline, and postembryonic development.
Organism  Caenorhabditis elegans Biotype  SO:0001217
Genetic Position  Length (nt)  ? 9684
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00003416

Genomics

0 Transcripts

 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.20b Y105E8A.20b 1575   I: 14486949-14487060
CDS:Y105E8A.20a Y105E8A.20a 1221   I: 14486949-14487060

2 RNAi Result

WormBase ID
WBRNAi00001395
WBRNAi00117017

0 Allele

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00003416 14486877 14496560 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_14486768..14486876   109 I: 14486768-14486876 Caenorhabditis elegans

0 Expression Clusters

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00003416 14486877 14496560 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
9684

1 Sequence Ontology Term