WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8A.20b Sequence Name  Y105E8A.20b
Length (nt)  1575   Chromosome Location  I: 14486949-14487060
Chromosome . Primary Identifier  I Chromosome Location . Start  14486949
Chromosome Location . End  14487060
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.20b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42774 MARS-2, isoform b 60.2 524 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00001395
WBRNAi00117017

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.20b 14486949 14487060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003416 mars-2 Y105E8A.20 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.20b 14486949 14487060 -1
CDS:Y105E8A.20b 14487807 14488032 -1
CDS:Y105E8A.20b 14489644 14489835 -1
CDS:Y105E8A.20b 14490567 14490778 -1
CDS:Y105E8A.20b 14492498 14492607 -1
CDS:Y105E8A.20b 14492664 14492903 -1
CDS:Y105E8A.20b 14494781 14495068 -1
CDS:Y105E8A.20b 14495131 14495252 -1
CDS:Y105E8A.20b 14496430 14496502 -1

1 Sequence

Length
1575

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8A.20b.1 Y105E8A.20b.1 1704   I: 14486878-14496560