WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.26b.1 Sequence Name  Y105E8A.26b.1
Length (nt)  3613   Chromosome Location  I: 14529529-14546869
Chromosome . Primary Identifier  I Chromosome Location . Start  14529529
Chromosome Location . End  14546869 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.26b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013683 zoo-1 Y105E8A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.26b Y105E8A.26b 3375   I: 14529532-14529627

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.26b.1 14529529 14546869 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35908   99   I: 14529529-14529627 Caenorhabditis elegans
Exon35911   54   I: 14531977-14532030 Caenorhabditis elegans
Exon35916   125   I: 14535952-14536076 Caenorhabditis elegans
Exon35919   100   I: 14536902-14537001 Caenorhabditis elegans
Exon35923   410   I: 14537059-14537468 Caenorhabditis elegans
Exon35927   205   I: 14537735-14537939 Caenorhabditis elegans
Exon35931   956   I: 14539193-14540148 Caenorhabditis elegans
Exon35935   544   I: 14541264-14541807 Caenorhabditis elegans
Exon35942   67   I: 14543340-14543406 Caenorhabditis elegans
Exon35946   337   I: 14543456-14543792 Caenorhabditis elegans
Exon35950   287   I: 14544621-14544907 Caenorhabditis elegans
Exon35955   429   I: 14546441-14546869 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.26b.1 14529529 14546869 1

1 Sequence

Length
3613

1 Sequence Ontology Term

Identifier Name Description
transcript