WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y105E8B.2a.1 Sequence Name  Y105E8B.2a.1
Length (nt)  2241   Chromosome Location  I: 14634453-14642568
Chromosome . Primary Identifier  I Chromosome Location . Start  14634453
Chromosome Location . End  14642568 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013687 exoc-8 Y105E8B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.2a Y105E8B.2a 2061   I: 14634626-14634766

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.2a.1 14634453 14642568 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36271   314   I: 14634453-14634766 Caenorhabditis elegans
Exon36273   127   I: 14635192-14635318 Caenorhabditis elegans
Exon36276   734   I: 14636286-14637019 Caenorhabditis elegans
Exon36277   161   I: 14637337-14637497 Caenorhabditis elegans
Exon36278   338   I: 14638603-14638940 Caenorhabditis elegans
Exon36280   340   I: 14641149-14641488 Caenorhabditis elegans
Exon36282   165   I: 14641549-14641713 Caenorhabditis elegans
Exon36285   62   I: 14642507-14642568 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.2a.1 14634453 14642568 -1

1 Sequence

Length
2241

1 Sequence Ontology Term

Identifier Name Description
transcript