WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8B.2a Sequence Name  Y105E8B.2a
Length (nt)  2061   Chromosome Location  I: 14634626-14634766
Chromosome . Primary Identifier  I Chromosome Location . Start  14634626
Chromosome Location . End  14634766
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28785 EXOC-8, isoform a 77.8 686 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00026544
WBRNAi00055237
WBRNAi00074918
WBRNAi00085740
WBRNAi00004469
WBRNAi00004470
WBRNAi00072706
WBRNAi00081462
WBRNAi00090926
WBRNAi00081470
WBRNAi00036486
WBRNAi00072705
WBRNAi00074917
WBRNAi00074916
WBRNAi00074915
WBRNAi00074914
WBRNAi00061704
WBRNAi00117019
WBRNAi00061606
WBRNAi00026542
WBRNAi00026543
WBRNAi00026545
WBRNAi00088622
WBRNAi00088729

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8B.2a 14634626 14634766 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013687 exoc-8 Y105E8B.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8B.2a 14634626 14634766 -1
CDS:Y105E8B.2a 14635192 14635318 -1
CDS:Y105E8B.2a 14636286 14637019 -1
CDS:Y105E8B.2a 14637337 14637497 -1
CDS:Y105E8B.2a 14638603 14638940 -1
CDS:Y105E8B.2a 14641149 14641488 -1
CDS:Y105E8B.2a 14641549 14641713 -1
CDS:Y105E8B.2a 14642507 14642561 -1

1 Sequence

Length
2061

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8B.2a.1 Y105E8B.2a.1 2241   I: 14634453-14642568