WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E5A.4 Sequence Name  Y54E5A.4
Length (nt)  1617   Chromosome Location  I: 14701310-14701530
Chromosome . Primary Identifier  I Chromosome Location . Start  14701310
Chromosome Location . End  14701530
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20315 NPP-4 54.4 538 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00026848
WBRNAi00094134
WBRNAi00022489
WBRNAi00094269
WBRNAi00064243
WBRNAi00071086
WBRNAi00037476
WBRNAi00057383
WBRNAi00026849
WBRNAi00078409
WBRNAi00094505
WBRNAi00094526

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.4 14701310 14701530 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003790 npp-4 Y54E5A.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.4 14701310 14701530 -1
CDS:Y54E5A.4 14703009 14703457 -1
CDS:Y54E5A.4 14704710 14705136 -1
CDS:Y54E5A.4 14705958 14706049 -1
CDS:Y54E5A.4 14706093 14706520 -1

1 Sequence

Length
1617

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E5A.4.1 Y54E5A.4.1 1807   I: 14701122-14706522