WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E5A.7a Sequence Name  Y54E5A.7a
Length (nt)  1869   Chromosome Location  I: 14711185-14711235
Chromosome . Primary Identifier  I Chromosome Location . Start  14711185
Chromosome Location . End  14711235
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5A.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20318 GID-1, isoform a 71.1 622 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00057386
WBRNAi00004744
WBRNAi00037478
WBRNAi00065296
WBRNAi00117008

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.7a 14711185 14711235 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013202 gid-1 Y54E5A.7 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.7a 14711185 14711235 1
CDS:Y54E5A.7a 14711292 14711357 1
CDS:Y54E5A.7a 14711399 14711489 1
CDS:Y54E5A.7a 14711799 14712265 1
CDS:Y54E5A.7a 14712635 14712821 1
CDS:Y54E5A.7a 14712906 14713088 1
CDS:Y54E5A.7a 14713340 14713493 1
CDS:Y54E5A.7a 14713549 14713789 1
CDS:Y54E5A.7a 14714138 14714303 1
CDS:Y54E5A.7a 14714427 14714557 1
CDS:Y54E5A.7a 14714621 14714752 1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E5A.7a.1 Y54E5A.7a.1 2250   I: 14711082-14715030