WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK337.1a.1 Sequence Name  ZK337.1a.1
Length (nt)  4911   Chromosome Location  I: 14994581-15001691
Chromosome . Primary Identifier  I Chromosome Location . Start  14994581
Chromosome Location . End  15001691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK337.1a ZK337.1a 4527   I: 14994773-14994879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1a.1 14994581 15001691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37090   144   I: 14994581-14994724 Caenorhabditis elegans
Exon37095   109   I: 14994771-14994879 Caenorhabditis elegans
Exon37097   241   I: 14994989-14995229 Caenorhabditis elegans
Exon37102   253   I: 14995278-14995530 Caenorhabditis elegans
Exon37107   199   I: 14995578-14995776 Caenorhabditis elegans
Exon37112   214   I: 14995825-14996038 Caenorhabditis elegans
Exon37117   225   I: 14996085-14996309 Caenorhabditis elegans
Exon37122   342   I: 14996356-14996697 Caenorhabditis elegans
Exon37127   87   I: 14996748-14996834 Caenorhabditis elegans
Exon37132   405   I: 14996949-14997353 Caenorhabditis elegans
Exon37137   67   I: 14997403-14997469 Caenorhabditis elegans
Exon37143   139   I: 14997544-14997682 Caenorhabditis elegans
Exon37147   226   I: 14997730-14997955 Caenorhabditis elegans
Exon37152   587   I: 14998004-14998590 Caenorhabditis elegans
Exon37157   981   I: 14999166-15000146 Caenorhabditis elegans
Exon37162   163   I: 15000909-15001071 Caenorhabditis elegans
Exon37167   111   I: 15001116-15001226 Caenorhabditis elegans
Exon37175   418   I: 15001274-15001691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK337.1a.1 14994581 15001691 1

1 Sequence

Length
4911

1 Sequence Ontology Term

Identifier Name Description
transcript