WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK337.1a Sequence Name  ZK337.1a
Length (nt)  4527   Chromosome Location  I: 14994773-14994879
Chromosome . Primary Identifier  I Chromosome Location . Start  14994773
Chromosome Location . End  14994879
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK337.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16718 TEP-1, isoform a 167.2 1508 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00059345
WBRNAi00004926
WBRNAi00038259
WBRNAi00115767

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK337.1a 14994773 14994879 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013969 tep-1 ZK337.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK337.1a 14994773 14994879 1
CDS:ZK337.1a 14994989 14995229 1
CDS:ZK337.1a 14995278 14995530 1
CDS:ZK337.1a 14995578 14995776 1
CDS:ZK337.1a 14995825 14996038 1
CDS:ZK337.1a 14996085 14996309 1
CDS:ZK337.1a 14996356 14996697 1
CDS:ZK337.1a 14996748 14996834 1
CDS:ZK337.1a 14996949 14997353 1
CDS:ZK337.1a 14997403 14997469 1
CDS:ZK337.1a 14997544 14997682 1
CDS:ZK337.1a 14997730 14997955 1
CDS:ZK337.1a 14998004 14998590 1
CDS:ZK337.1a 14999166 15000146 1
CDS:ZK337.1a 15000909 15001071 1
CDS:ZK337.1a 15001116 15001226 1
CDS:ZK337.1a 15001274 15001453 1

1 Sequence

Length
4527

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK337.1a.1 ZK337.1a.1 4911   I: 14994581-15001691
Transcript:ZK337.1a.2 ZK337.1a.2 4831   I: 14994707-15001691