WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1069.3b.1 Sequence Name  D1069.3b.1
Length (nt)  2068   Chromosome Location  II: 341716-347891
Chromosome . Primary Identifier  II Chromosome Location . Start  341716
Chromosome Location . End  347891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1069.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017037 D1069.3 D1069.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1069.3b D1069.3b 1530   II: 342137-342250

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1069.3b.1 341716 347891 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38705   535   II: 341716-342250 Caenorhabditis elegans
Exon38710   162   II: 343026-343187 Caenorhabditis elegans
Exon38714   252   II: 343795-344046 Caenorhabditis elegans
Exon38718   90   II: 344271-344360 Caenorhabditis elegans
Exon38721   245   II: 344930-345174 Caenorhabditis elegans
Exon38724   157   II: 346289-346445 Caenorhabditis elegans
Exon38727   117   II: 347090-347206 Caenorhabditis elegans
Exon38730   164   II: 347253-347416 Caenorhabditis elegans
Exon38733   109   II: 347466-347574 Caenorhabditis elegans
Exon38738   237   II: 347655-347891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1069.3b.1 341716 347891 -1

1 Sequence

Length
2068

1 Sequence Ontology Term

Identifier Name Description
transcript