WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E8.11a.1 Sequence Name  K07E8.11a.1
Length (nt)  1075   Chromosome Location  II: 669463-671125
Chromosome . Primary Identifier  II Chromosome Location . Start  669463
Chromosome Location . End  671125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E8.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005558 sri-46 K07E8.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E8.11a K07E8.11a 1032   II: 669506-669678

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E8.11a.1 669463 671125 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39473   216   II: 669463-669678 Caenorhabditis elegans
Exon39475   313   II: 669724-670036 Caenorhabditis elegans
Exon39478   219   II: 670080-670298 Caenorhabditis elegans
Exon39479   123   II: 670748-670870 Caenorhabditis elegans
Exon39480   204   II: 670922-671125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E8.11a.1 669463 671125 -1

1 Sequence

Length
1075

1 Sequence Ontology Term

Identifier Name Description
transcript