WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07E8.11a Sequence Name  K07E8.11a
Length (nt)  1032   Chromosome Location  II: 669506-669678
Chromosome . Primary Identifier  II Chromosome Location . Start  669506
Chromosome Location . End  669678
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E8.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11906 SRI-46, isoform a 38.5 343 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00050174
WBRNAi00016738

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07E8.11a 669506 669678 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005558 sri-46 K07E8.11 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07E8.11a 669506 669678 -1
CDS:K07E8.11a 669724 670036 -1
CDS:K07E8.11a 670080 670298 -1
CDS:K07E8.11a 670748 670870 -1
CDS:K07E8.11a 670922 671125 -1

1 Sequence

Length
1032

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07E8.11a.1 K07E8.11a.1 1075   II: 669463-671125