WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13B5.3.1 Sequence Name  T13B5.3.1
Length (nt)  1369   Chromosome Location  II: 1097927-1100819
Chromosome . Primary Identifier  II Chromosome Location . Start  1097927
Chromosome Location . End  1100819 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13B5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020471 pho-14 T13B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13B5.3 T13B5.3 1323   II: 1097966-1098076

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.3.1 1097927 1100819 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40292   150   II: 1097927-1098076 Caenorhabditis elegans
Exon40293   93   II: 1098585-1098677 Caenorhabditis elegans
Exon40294   135   II: 1098728-1098862 Caenorhabditis elegans
Exon40295   119   II: 1099137-1099255 Caenorhabditis elegans
Exon40296   139   II: 1099306-1099444 Caenorhabditis elegans
Exon40297   241   II: 1099597-1099837 Caenorhabditis elegans
Exon40298   110   II: 1099895-1100004 Caenorhabditis elegans
Exon40299   105   II: 1100047-1100151 Caenorhabditis elegans
Exon40300   195   II: 1100487-1100681 Caenorhabditis elegans
Exon40301   82   II: 1100738-1100819 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.3.1 1097927 1100819 -1

1 Sequence

Length
1369

1 Sequence Ontology Term

Identifier Name Description
transcript