WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08E3.6.1 Sequence Name  C08E3.6.1
Length (nt)  1237   Chromosome Location  II: 1609252-1610730
Chromosome . Primary Identifier  II Chromosome Location . Start  1609252
Chromosome Location . End  1610730 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08E3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015598 fbxa-163 C08E3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08E3.6 C08E3.6 1158   II: 1609316-1609528

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08E3.6.1 1609252 1610730 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41347   277   II: 1609252-1609528 Caenorhabditis elegans
Exon41348   664   II: 1609595-1610258 Caenorhabditis elegans
Exon41349   84   II: 1610308-1610391 Caenorhabditis elegans
Exon41350   212   II: 1610519-1610730 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08E3.6.1 1609252 1610730 -1

1 Sequence

Length
1237

1 Sequence Ontology Term

Identifier Name Description
transcript