WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H5.3b.1 Sequence Name  F36H5.3b.1
Length (nt)  2532   Chromosome Location  II: 1763372-1766555
Chromosome . Primary Identifier  II Chromosome Location . Start  1763372
Chromosome Location . End  1766555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018102 math-28 F36H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H5.3b F36H5.3b 2532   II: 1763372-1763523

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H5.3b.1 1763372 1766555 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41634   152   II: 1763372-1763523 Caenorhabditis elegans
Exon41636   278   II: 1763570-1763847 Caenorhabditis elegans
Exon41638   115   II: 1763889-1764003 Caenorhabditis elegans
Exon41640   278   II: 1764064-1764341 Caenorhabditis elegans
Exon41642   127   II: 1764383-1764509 Caenorhabditis elegans
Exon41644   342   II: 1764675-1765016 Caenorhabditis elegans
Exon41646   99   II: 1765071-1765169 Caenorhabditis elegans
Exon41648   278   II: 1765213-1765490 Caenorhabditis elegans
Exon41650   127   II: 1765535-1765661 Caenorhabditis elegans
Exon41652   278   II: 1765706-1765983 Caenorhabditis elegans
Exon41654   112   II: 1766027-1766138 Caenorhabditis elegans
Exon41655   346   II: 1766210-1766555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H5.3b.1 1763372 1766555 1

1 Sequence

Length
2532

1 Sequence Ontology Term

Identifier Name Description
transcript