WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16C8.2 Sequence Name  C16C8.2
Length (nt)  2190   Chromosome Location  II: 3431575-3431632
Chromosome . Primary Identifier  II Chromosome Location . Start  3431575
Chromosome Location . End  3431632
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C8.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23553 SKPO-2 81.8 729 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040720
WBRNAi00010855
WBRNAi00010856
WBRNAi00028965

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16C8.2 3431575 3431632 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015841 skpo-2 C16C8.2 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16C8.2 3431575 3431632 -1
CDS:C16C8.2 3431938 3432096 -1
CDS:C16C8.2 3432138 3432255 -1
CDS:C16C8.2 3432308 3432803 -1
CDS:C16C8.2 3433148 3433253 -1
CDS:C16C8.2 3433307 3433400 -1
CDS:C16C8.2 3433450 3433543 -1
CDS:C16C8.2 3433601 3433715 -1
CDS:C16C8.2 3433774 3433928 -1
CDS:C16C8.2 3433986 3434053 -1
CDS:C16C8.2 3434104 3434323 -1
CDS:C16C8.2 3434366 3434699 -1
CDS:C16C8.2 3434841 3434955 -1
CDS:C16C8.2 3436402 3436459 -1

1 Sequence

Length
2190

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16C8.2.1 C16C8.2.1 2536   II: 3431282-3436512