WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G7.9b.1 Sequence Name  F10G7.9b.1
Length (nt)  2490   Chromosome Location  II: 4703257-4706485
Chromosome . Primary Identifier  II Chromosome Location . Start  4703257
Chromosome Location . End  4706485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017372 F10G7.9 F10G7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.9b F10G7.9b 1935   II: 4703484-4703626

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.9b.1 4703257 4706485 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48364   370   II: 4703257-4703626 Caenorhabditis elegans
Exon48366   95   II: 4703757-4703851 Caenorhabditis elegans
Exon48368   132   II: 4703900-4704031 Caenorhabditis elegans
Exon48370   211   II: 4704084-4704294 Caenorhabditis elegans
Exon48372   215   II: 4704341-4704555 Caenorhabditis elegans
Exon48374   1040   II: 4704608-4705647 Caenorhabditis elegans
Exon48376   74   II: 4705696-4705769 Caenorhabditis elegans
Exon48378   84   II: 4705947-4706030 Caenorhabditis elegans
Exon48380   64   II: 4706079-4706142 Caenorhabditis elegans
Exon48382   82   II: 4706186-4706267 Caenorhabditis elegans
Exon48383   37   II: 4706319-4706355 Caenorhabditis elegans
Exon48385   86   II: 4706400-4706485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.9b.1 4703257 4706485 -1

1 Sequence

Length
2490

1 Sequence Ontology Term

Identifier Name Description
transcript