WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04G6.3 Sequence Name  C04G6.3
Length (nt)  4284   Chromosome Location  II: 5084223-5084323
Chromosome . Primary Identifier  II Chromosome Location . Start  5084223
Chromosome Location . End  5084323
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G6.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27651 PLD-1 163.5 1427 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00039669
WBRNAi00010154
WBRNAi00010155
WBRNAi00010157
WBRNAi00076079
WBRNAi00109604
WBRNAi00028463
WBRNAi00109216
WBRNAi00116146
WBRNAi00109313
WBRNAi00087660
WBRNAi00109507
WBRNAi00109410

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04G6.3 5084223 5084323 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004040 pld-1 C04G6.3 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04G6.3 5084223 5084323 -1
CDS:C04G6.3 5084482 5084605 -1
CDS:C04G6.3 5084980 5085120 -1
CDS:C04G6.3 5085448 5085573 -1
CDS:C04G6.3 5086118 5086210 -1
CDS:C04G6.3 5086400 5086631 -1
CDS:C04G6.3 5086682 5086788 -1
CDS:C04G6.3 5086835 5087029 -1
CDS:C04G6.3 5087658 5087791 -1
CDS:C04G6.3 5087845 5089436 -1
CDS:C04G6.3 5089488 5089643 -1
CDS:C04G6.3 5089767 5090272 -1
CDS:C04G6.3 5090321 5090435 -1
CDS:C04G6.3 5090701 5090829 -1
CDS:C04G6.3 5090878 5091022 -1
CDS:C04G6.3 5091069 5091195 -1
CDS:C04G6.3 5091241 5091413 -1
CDS:C04G6.3 5091549 5091636 -1

1 Sequence

Length
4284

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04G6.3.1 C04G6.3.1 4713   II: 5083848-5091690