WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59G1.1b.1 Sequence Name  F59G1.1b.1
Length (nt)  1782   Chromosome Location  II: 5911324-5916910
Chromosome . Primary Identifier  II Chromosome Location . Start  5911324
Chromosome Location . End  5916910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59G1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019127 cgt-3 F59G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59G1.1b F59G1.1b 1413   II: 5912604-5912667

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59G1.1b.1 5911324 5916910 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51818   60   II: 5911324-5911383 Caenorhabditis elegans
Exon51821   111   II: 5912557-5912667 Caenorhabditis elegans
Exon51826   268   II: 5915054-5915321 Caenorhabditis elegans
Exon51831   236   II: 5915373-5915608 Caenorhabditis elegans
Exon51836   221   II: 5915663-5915883 Caenorhabditis elegans
Exon51841   324   II: 5915934-5916257 Caenorhabditis elegans
Exon51846   132   II: 5916301-5916432 Caenorhabditis elegans
Exon51851   430   II: 5916481-5916910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59G1.1b.1 5911324 5916910 1

1 Sequence

Length
1782

1 Sequence Ontology Term

Identifier Name Description
transcript