WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59G1.1b Sequence Name  F59G1.1b
Length (nt)  1413   Chromosome Location  II: 5912604-5912667
Chromosome . Primary Identifier  II Chromosome Location . Start  5912604
Chromosome Location . End  5912667
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59G1.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29811 CGT-3, isoform b 52.3 470 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00049231
WBRNAi00049232
WBRNAi00016142
WBRNAi00078082
WBRNAi00078081
WBRNAi00033226
WBRNAi00083996
WBRNAi00065438
WBRNAi00078078
WBRNAi00078079
WBRNAi00078077
WBRNAi00112310
WBRNAi00078080
WBRNAi00083974
WBRNAi00115313
WBRNAi00078076
WBRNAi00088628
WBRNAi00088735

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F59G1.1b 5912604 5912667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019127 cgt-3 F59G1.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F59G1.1b 5912604 5912667 1
CDS:F59G1.1b 5915054 5915321 1
CDS:F59G1.1b 5915373 5915608 1
CDS:F59G1.1b 5915663 5915883 1
CDS:F59G1.1b 5915934 5916257 1
CDS:F59G1.1b 5916301 5916432 1
CDS:F59G1.1b 5916481 5916648 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59G1.1b.1 F59G1.1b.1 1782   II: 5911324-5916910
Transcript:F59G1.1b.2 F59G1.1b.2 1722   II: 5912557-5916910