WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21D12.1d.1 Sequence Name  F21D12.1d.1
Length (nt)  1495   Chromosome Location  II: 7339263-7349123
Chromosome . Primary Identifier  II Chromosome Location . Start  7339263
Chromosome Location . End  7349123 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D12.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003620 nhr-21 F21D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21D12.1d F21D12.1d 1341   II: 7339263-7339278

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1d.1 7339263 7349123 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56713   16   II: 7339263-7339278 Caenorhabditis elegans
Exon56722   92   II: 7346510-7346601 Caenorhabditis elegans
Exon56730   121   II: 7346650-7346770 Caenorhabditis elegans
Exon56739   148   II: 7347374-7347521 Caenorhabditis elegans
Exon56747   175   II: 7347577-7347751 Caenorhabditis elegans
Exon56755   264   II: 7347800-7348063 Caenorhabditis elegans
Exon56763   146   II: 7348128-7348273 Caenorhabditis elegans
Exon56772   107   II: 7348324-7348430 Caenorhabditis elegans
Exon56779   161   II: 7348651-7348811 Caenorhabditis elegans
Exon56783   265   II: 7348859-7349123 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21D12.1d.1 7339263 7349123 1

1 Sequence

Length
1495

1 Sequence Ontology Term

Identifier Name Description
transcript