WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DH11.1c.1 Sequence Name  DH11.1c.1
Length (nt)  1867   Chromosome Location  II: 8008634-8011400
Chromosome . Primary Identifier  II Chromosome Location . Start  8008634
Chromosome Location . End  8011400 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DH11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008435 glna-2 DH11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DH11.1c DH11.1c 1041   II: 8010062-8010277

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DH11.1c.1 8008634 8011400 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58874   110   II: 8008634-8008743 Caenorhabditis elegans
Exon58877   176   II: 8008946-8009121 Caenorhabditis elegans
Exon58879   149   II: 8009168-8009316 Caenorhabditis elegans
Exon58881   211   II: 8009361-8009571 Caenorhabditis elegans
Exon58886   163   II: 8009754-8009916 Caenorhabditis elegans
Exon58890   233   II: 8010045-8010277 Caenorhabditis elegans
Exon58895   216   II: 8010337-8010552 Caenorhabditis elegans
Exon58900   132   II: 8010596-8010727 Caenorhabditis elegans
Exon58907   378   II: 8010778-8011155 Caenorhabditis elegans
Exon58912   99   II: 8011302-8011400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DH11.1c.1 8008634 8011400 1

1 Sequence

Length
1867

1 Sequence Ontology Term

Identifier Name Description
transcript