WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05C12.6a Sequence Name  T05C12.6a
Length (nt)  2019   Chromosome Location  II: 8182478-8182626
Chromosome . Primary Identifier  II Chromosome Location . Start  8182478
Chromosome Location . End  8182626
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C12.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02318 MIG-5, isoform a 75.0 672 Caenorhabditis elegans
 

Other

61 RNAi

WormBase ID
WBRNAi00093563
WBRNAi00022935
WBRNAi00022936
WBRNAi00101896
WBRNAi00101354
WBRNAi00068155
WBRNAi00052493
WBRNAi00052494
WBRNAi00009114
WBRNAi00091579
WBRNAi00062603
WBRNAi00062604
WBRNAi00098791
WBRNAi00098790
WBRNAi00098793
WBRNAi00098792
WBRNAi00061143
WBRNAi00061149
WBRNAi00062626
WBRNAi00102201
WBRNAi00101833
WBRNAi00078113
WBRNAi00078112
WBRNAi00101836
WBRNAi00078120
WBRNAi00098870
WBRNAi00098869
WBRNAi00035194
WBRNAi00111847
WBRNAi00101861

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05C12.6a 8182478 8182626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003241 mig-5 T05C12.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05C12.6a 8182478 8182626 -1
CDS:T05C12.6a 8182790 8183314 -1
CDS:T05C12.6a 8183363 8183688 -1
CDS:T05C12.6a 8183735 8183857 -1
CDS:T05C12.6a 8183900 8184377 -1
CDS:T05C12.6a 8184430 8184505 -1
CDS:T05C12.6a 8184547 8184700 -1
CDS:T05C12.6a 8184755 8184903 -1
CDS:T05C12.6a 8184970 8185008 -1

1 Sequence

Length
2019

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05C12.6a.1 T05C12.6a.1 2189   II: 8182323-8185023