WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44G4.8b.1 Sequence Name  F44G4.8b.1
Length (nt)  1248   Chromosome Location  II: 9006171-9007992
Chromosome . Primary Identifier  II Chromosome Location . Start  9006171
Chromosome Location . End  9007992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44G4.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009717 dep-1 F44G4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44G4.8b F44G4.8b 1248   II: 9006171-9006311

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44G4.8b.1 9006171 9007992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62351   141   II: 9006171-9006311 Caenorhabditis elegans
Exon62353   136   II: 9006576-9006711 Caenorhabditis elegans
Exon62355   230   II: 9006765-9006994 Caenorhabditis elegans
Exon62357   451   II: 9007043-9007493 Caenorhabditis elegans
Exon62358   290   II: 9007703-9007992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44G4.8b.1 9006171 9007992 -1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
transcript