WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F44G4.8b Sequence Name  F44G4.8b
Length (nt)  1248   Chromosome Location  II: 9006171-9006311
Chromosome . Primary Identifier  II Chromosome Location . Start  9006171
Chromosome Location . End  9006311
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44G4.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43204 DEP-1, isoform b 46.4 415 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00032270

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F44G4.8b 9006171 9006311 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009717 dep-1 F44G4.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F44G4.8b 9006171 9006311 -1
CDS:F44G4.8b 9006576 9006711 -1
CDS:F44G4.8b 9006765 9006994 -1
CDS:F44G4.8b 9007043 9007493 -1
CDS:F44G4.8b 9007703 9007992 -1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F44G4.8b.1 F44G4.8b.1 1248   II: 9006171-9007992