Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:M176.15 | M176.15 |
216
 |
II: 9416488-9416703 |
Other
10 Allele
| Public Name |
|---|
| gk963801 |
| gk963053 |
| gk962682 |
| gk962798 |
| WBVar02122362 |
| gk963619 |
| gk963620 |
| tm672 |
| gk696136 |
| gk150840 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00202355 | 9416488 | 9416703 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrII_9416704..9417012 | 309 | II: 9416704-9417012 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_downregulated_neuron | |
| Transcripts that showed significantly increased expression in mrpl-2(osa3) comparing to wild-type animals. | Differential expression analysis was performed using DESeq2R package(v.1.10.1).Relative expression of genes with Benjamini-Hochberg corrected P-values (Padj)<0.05 were considered to be differentially expressed. | WBPaper00060951:mrpl-2(osa3)_upregulated | |
| Single-cell RNA-Seq cell group 20_1 expressed in neuron. | scVI 0.6.0 | WBPaper00065841:20_1 |