WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.6b.1 Sequence Name  Y17G7B.6b.1
Length (nt)  1088   Chromosome Location  II: 12013166-12023832
Chromosome . Primary Identifier  II Chromosome Location . Start  12013166
Chromosome Location . End  12023832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012461 glb-29 Y17G7B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.6b Y17G7B.6b 906   II: 12013183-12013245

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.6b.1 12013166 12023832 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70810   80   II: 12013166-12013245 Caenorhabditis elegans
Exon70813   125   II: 12013784-12013908 Caenorhabditis elegans
Exon70816   102   II: 12016268-12016369 Caenorhabditis elegans
Exon70819   106   II: 12022077-12022182 Caenorhabditis elegans
Exon70823   92   II: 12022520-12022611 Caenorhabditis elegans
Exon70827   187   II: 12022708-12022894 Caenorhabditis elegans
Exon70831   150   II: 12023387-12023536 Caenorhabditis elegans
Exon70836   246   II: 12023587-12023832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.6b.1 12013166 12023832 1

1 Sequence

Length
1088

1 Sequence Ontology Term

Identifier Name Description
transcript