WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38E10A.6a Sequence Name  Y38E10A.6a
Length (nt)  4032   Chromosome Location  II: 12582376-12582459
Chromosome . Primary Identifier  II Chromosome Location . Start  12582376
Chromosome Location . End  12582459
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35654 CEH-100, isoform a 156.6 1343 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00056027
WBRNAi00020277
WBRNAi00036848
WBRNAi00061545

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38E10A.6a 12582376 12582459 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012584 ceh-100 Y38E10A.6 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38E10A.6a 12582376 12582459 -1
CDS:Y38E10A.6a 12583454 12583528 -1
CDS:Y38E10A.6a 12584502 12585032 -1
CDS:Y38E10A.6a 12586213 12586386 -1
CDS:Y38E10A.6a 12587239 12588000 -1
CDS:Y38E10A.6a 12589036 12589209 -1
CDS:Y38E10A.6a 12590573 12590896 -1
CDS:Y38E10A.6a 12591890 12592063 -1
CDS:Y38E10A.6a 12593010 12593171 -1
CDS:Y38E10A.6a 12593320 12593439 -1
CDS:Y38E10A.6a 12594251 12594385 -1
CDS:Y38E10A.6a 12595077 12595250 -1
CDS:Y38E10A.6a 12596133 12596303 -1
CDS:Y38E10A.6a 12596451 12596570 -1
CDS:Y38E10A.6a 12598091 12598330 -1
CDS:Y38E10A.6a 12600791 12600964 -1
CDS:Y38E10A.6a 12602099 12602284 -1
CDS:Y38E10A.6a 12603429 12603680 -1

1 Sequence

Length
4032

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38E10A.6a.1 Y38E10A.6a.1 4229   II: 12582179-12603680