WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G4.3e.1 Sequence Name  F42G4.3e.1
Length (nt)  1944   Chromosome Location  II: 13057152-13071513
Chromosome . Primary Identifier  II Chromosome Location . Start  13057152
Chromosome Location . End  13071513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G4.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006999 zyx-1 F42G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G4.3e F42G4.3e 1944   II: 13057152-13057196

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G4.3e.1 13057152 13071513 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72782   45   II: 13057152-13057196 Caenorhabditis elegans
Exon72787   285   II: 13059197-13059481 Caenorhabditis elegans
Exon72790   84   II: 13059557-13059640 Caenorhabditis elegans
Exon72792   341   II: 13059687-13060027 Caenorhabditis elegans
Exon72795   277   II: 13060626-13060902 Caenorhabditis elegans
Exon72799   193   II: 13064886-13065078 Caenorhabditis elegans
Exon72807   170   II: 13068740-13068909 Caenorhabditis elegans
Exon72812   179   II: 13069014-13069192 Caenorhabditis elegans
Exon72817   148   II: 13069824-13069971 Caenorhabditis elegans
Exon72822   222   II: 13071292-13071513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G4.3e.1 13057152 13071513 1

1 Sequence

Length
1944

1 Sequence Ontology Term

Identifier Name Description
transcript