WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19H8.1a.1 Sequence Name  F19H8.1a.1
Length (nt)  3839   Chromosome Location  II: 14600902-14610554
Chromosome . Primary Identifier  II Chromosome Location . Start  14600902
Chromosome Location . End  14610554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19H8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006603 tps-2 F19H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19H8.1a F19H8.1a 3690   II: 14600909-14601249

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19H8.1a.1 14600902 14610554 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75313   348   II: 14600902-14601249 Caenorhabditis elegans
Exon75314   114   II: 14601293-14601406 Caenorhabditis elegans
Exon75315   158   II: 14601453-14601610 Caenorhabditis elegans
Exon75316   280   II: 14601665-14601944 Caenorhabditis elegans
Exon75317   701   II: 14601999-14602699 Caenorhabditis elegans
Exon75318   803   II: 14602919-14603721 Caenorhabditis elegans
Exon75319   309   II: 14603767-14604075 Caenorhabditis elegans
Exon75334   57   II: 14608319-14608375 Caenorhabditis elegans
Exon75335   126   II: 14608710-14608835 Caenorhabditis elegans
Exon75336   207   II: 14609242-14609448 Caenorhabditis elegans
Exon75338   246   II: 14609492-14609737 Caenorhabditis elegans
Exon75340   78   II: 14609783-14609860 Caenorhabditis elegans
Exon75342   126   II: 14610087-14610212 Caenorhabditis elegans
Exon75345   286   II: 14610269-14610554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19H8.1a.1 14600902 14610554 1

1 Sequence

Length
3839

1 Sequence Ontology Term

Identifier Name Description
transcript