WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F19H8.1a Sequence Name  F19H8.1a
Length (nt)  3690   Chromosome Location  II: 14600909-14601249
Chromosome . Primary Identifier  II Chromosome Location . Start  14600909
Chromosome Location . End  14601249
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19H8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37507 TPS-2, isoform a 139.9 1229 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00045047
WBRNAi00045048
WBRNAi00045049
WBRNAi00013578
WBRNAi00013579
WBRNAi00076318
WBRNAi00062698
WBRNAi00062701
WBRNAi00103293
WBRNAi00082780
WBRNAi00082779
WBRNAi00082781

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F19H8.1a 14600909 14601249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006603 tps-2 F19H8.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F19H8.1a 14600909 14601249 1
CDS:F19H8.1a 14601293 14601406 1
CDS:F19H8.1a 14601453 14601610 1
CDS:F19H8.1a 14601665 14601944 1
CDS:F19H8.1a 14601999 14602699 1
CDS:F19H8.1a 14602919 14603721 1
CDS:F19H8.1a 14603767 14604075 1
CDS:F19H8.1a 14608319 14608375 1
CDS:F19H8.1a 14608710 14608835 1
CDS:F19H8.1a 14609242 14609448 1
CDS:F19H8.1a 14609492 14609737 1
CDS:F19H8.1a 14609783 14609860 1
CDS:F19H8.1a 14610087 14610212 1
CDS:F19H8.1a 14610269 14610412 1

1 Sequence

Length
3690

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F19H8.1a.1 F19H8.1a.1 3839   II: 14600902-14610554