WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2d.1 Sequence Name  ZC101.2d.1
Length (nt)  12546   Chromosome Location  II: 14647321-14684456
Chromosome . Primary Identifier  II Chromosome Location . Start  14647321
Chromosome Location . End  14684456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2d ZC101.2d 12228   II: 14647479-14647857

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2d.1 14647321 14684456 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

44 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75425   537   II: 14647321-14647857 Caenorhabditis elegans
Exon75428   223   II: 14647920-14648142 Caenorhabditis elegans
Exon75431   276   II: 14648552-14648827 Caenorhabditis elegans
Exon75434   550   II: 14648886-14649435 Caenorhabditis elegans
Exon75437   113   II: 14649495-14649607 Caenorhabditis elegans
Exon75440   148   II: 14649651-14649798 Caenorhabditis elegans
Exon75443   170   II: 14649844-14650013 Caenorhabditis elegans
Exon75446   219   II: 14650061-14650279 Caenorhabditis elegans
Exon75449   213   II: 14650326-14650538 Caenorhabditis elegans
Exon75452   305   II: 14650594-14650898 Caenorhabditis elegans
Exon75456   208   II: 14651003-14651210 Caenorhabditis elegans
Exon75471   127   II: 14652683-14652809 Caenorhabditis elegans
Exon75475   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75490   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75503   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75516   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75529   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75541   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75552   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75562   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75572   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75585   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75598   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75631   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75645   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75659   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75673   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75687   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75697   12   II: 14664402-14664413 Caenorhabditis elegans
Exon75701   346   II: 14664632-14664977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2d.1 14647321 14684456 -1

1 Sequence

Length
12546

1 Sequence Ontology Term

Identifier Name Description
transcript