WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E2A.1 Sequence Name  Y54E2A.1
Length (nt)  1842   Chromosome Location  II: 14734510-14734627
Chromosome . Primary Identifier  II Chromosome Location . Start  14734510
Chromosome Location . End  14734627
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31259 NPR-34 69.5 613 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00057367
WBRNAi00037467
WBRNAi00000244
WBRNAi00010531
WBRNAi00020975
WBRNAi00117912

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E2A.1 14734510 14734627 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013187 npr-34 Y54E2A.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E2A.1 14734510 14734627 -1
CDS:Y54E2A.1 14735275 14735370 -1
CDS:Y54E2A.1 14735414 14735521 -1
CDS:Y54E2A.1 14735566 14735807 -1
CDS:Y54E2A.1 14736074 14736328 -1
CDS:Y54E2A.1 14737181 14737340 -1
CDS:Y54E2A.1 14737391 14737500 -1
CDS:Y54E2A.1 14737559 14737802 -1
CDS:Y54E2A.1 14737850 14738082 -1
CDS:Y54E2A.1 14738128 14738262 -1
CDS:Y54E2A.1 14739097 14739237 -1

1 Sequence

Length
1842

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E2A.1.1 Y54E2A.1.1 1953   II: 14734405-14739243