WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F9.7.1 Sequence Name  C29F9.7.1
Length (nt)  1597   Chromosome Location  III: 89453-94809
Chromosome . Primary Identifier  III Chromosome Location . Start  89453
Chromosome Location . End  94809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003931 pat-4 C29F9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F9.7 C29F9.7 1401   III: 89643-89789

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.7.1 89453 94809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76907   337   III: 89453-89789 Caenorhabditis elegans
Exon76908   259   III: 90424-90682 Caenorhabditis elegans
Exon76909   94   III: 91099-91192 Caenorhabditis elegans
Exon76910   256   III: 91607-91862 Caenorhabditis elegans
Exon76911   146   III: 92492-92637 Caenorhabditis elegans
Exon76912   97   III: 93134-93230 Caenorhabditis elegans
Exon76913   306   III: 93840-94145 Caenorhabditis elegans
Exon76914   102   III: 94708-94809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F9.7.1 89453 94809 -1

1 Sequence

Length
1597

1 Sequence Ontology Term

Identifier Name Description
transcript