WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C29F9.7 Sequence Name  C29F9.7
Length (nt)  1401   Chromosome Location  III: 89643-89789
Chromosome . Primary Identifier  III Chromosome Location . Start  89643
Chromosome Location . End  89789
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F9.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19706 PAT-4 52.2 466 Caenorhabditis elegans
 

Other

40 RNAi

WormBase ID
WBRNAi00078627
WBRNAi00024673
WBRNAi00041498
WBRNAi00008463
WBRNAi00029337
WBRNAi00109188
WBRNAi00116132
WBRNAi00112361
WBRNAi00077522
WBRNAi00112552
WBRNAi00085343
WBRNAi00071243
WBRNAi00091714
WBRNAi00071697
WBRNAi00086102
WBRNAi00022994
WBRNAi00109286
WBRNAi00081073
WBRNAi00091729
WBRNAi00109480
WBRNAi00066199
WBRNAi00091669
WBRNAi00002692
WBRNAi00063955
WBRNAi00063956
WBRNAi00114632
WBRNAi00083949
WBRNAi00091744
WBRNAi00112553
WBRNAi00112555

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C29F9.7 89643 89789 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003931 pat-4 C29F9.7 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C29F9.7 89643 89789 -1
CDS:C29F9.7 90424 90682 -1
CDS:C29F9.7 91099 91192 -1
CDS:C29F9.7 91607 91862 -1
CDS:C29F9.7 92492 92637 -1
CDS:C29F9.7 93134 93230 -1
CDS:C29F9.7 93840 94145 -1
CDS:C29F9.7 94708 94803 -1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C29F9.7.1 C29F9.7.1 1597   III: 89453-94809