WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4j.1 Sequence Name  T17H7.4j.1
Length (nt)  2608   Chromosome Location  III: 727208-752426
Chromosome . Primary Identifier  III Chromosome Location . Start  727208
Chromosome Location . End  752426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4j T17H7.4j 2151   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4j.1 727208 752426 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77972   498   III: 727208-727705 Caenorhabditis elegans
Exon77989   117   III: 727948-728064 Caenorhabditis elegans
Exon78002   310   III: 728117-728426 Caenorhabditis elegans
Exon78019   163   III: 728882-729044 Caenorhabditis elegans
Exon78034   101   III: 729093-729193 Caenorhabditis elegans
Exon78055   106   III: 729580-729685 Caenorhabditis elegans
Exon78070   159   III: 729986-730144 Caenorhabditis elegans
Exon78082   93   III: 730592-730684 Caenorhabditis elegans
Exon78094   87   III: 731532-731618 Caenorhabditis elegans
Exon78104   129   III: 731676-731804 Caenorhabditis elegans
Exon78120   21   III: 731906-731926 Caenorhabditis elegans
Exon78191   21   III: 739327-739347 Caenorhabditis elegans
Exon78199   99   III: 739660-739758 Caenorhabditis elegans
Exon78207   99   III: 739808-739906 Caenorhabditis elegans
Exon78215   135   III: 739955-740089 Caenorhabditis elegans
Exon78226   198   III: 742985-743182 Caenorhabditis elegans
Exon78236   116   III: 746452-746567 Caenorhabditis elegans
Exon78237   72   III: 746620-746691 Caenorhabditis elegans
Exon78240   84   III: 752343-752426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4j.1 727208 752426 -1

1 Sequence

Length
2608

1 Sequence Ontology Term

Identifier Name Description
transcript