WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T17H7.4j Sequence Name  T17H7.4j
Length (nt)  2151   Chromosome Location  III: 727639-727705
Chromosome . Primary Identifier  III Chromosome Location . Start  727639
Chromosome Location . End  727705
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4j

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31617 PAT-12, isoform j 82.9 716 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00053462
WBRNAi00066812
WBRNAi00024291
WBRNAi00002646
WBRNAi00035633
WBRNAi00062896
WBRNAi00062901

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T17H7.4j 727639 727705 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:T17H7.4j 727639 727705 -1
CDS:T17H7.4j 727948 728064 -1
CDS:T17H7.4j 728117 728426 -1
CDS:T17H7.4j 728882 729044 -1
CDS:T17H7.4j 729093 729193 -1
CDS:T17H7.4j 729580 729685 -1
CDS:T17H7.4j 729986 730144 -1
CDS:T17H7.4j 730592 730684 -1
CDS:T17H7.4j 731532 731618 -1
CDS:T17H7.4j 731676 731804 -1
CDS:T17H7.4j 731906 731926 -1
CDS:T17H7.4j 739327 739347 -1
CDS:T17H7.4j 739660 739758 -1
CDS:T17H7.4j 739808 739906 -1
CDS:T17H7.4j 739955 740089 -1
CDS:T17H7.4j 742985 743182 -1
CDS:T17H7.4j 746452 746567 -1
CDS:T17H7.4j 746620 746691 -1
CDS:T17H7.4j 752343 752400 -1

1 Sequence

Length
2151

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T17H7.4j.1 T17H7.4j.1 2608   III: 727208-752426