WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F8.3a.1 Sequence Name  F08F8.3a.1
Length (nt)  2335   Chromosome Location  III: 7338835-7343667
Chromosome . Primary Identifier  III Chromosome Location . Start  7338835
Chromosome Location . End  7343667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002182 kap-1 F08F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.3a F08F8.3a 2133   III: 7339001-7339070

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3a.1 7338835 7343667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95056   104   III: 7338835-7338938 Caenorhabditis elegans
Exon95058   74   III: 7338997-7339070 Caenorhabditis elegans
Exon95060   73   III: 7339135-7339207 Caenorhabditis elegans
Exon95063   238   III: 7339654-7339891 Caenorhabditis elegans
Exon95066   112   III: 7340247-7340358 Caenorhabditis elegans
Exon95069   137   III: 7340451-7340587 Caenorhabditis elegans
Exon95072   139   III: 7340650-7340788 Caenorhabditis elegans
Exon95075   88   III: 7340835-7340922 Caenorhabditis elegans
Exon95078   355   III: 7341053-7341407 Caenorhabditis elegans
Exon95081   219   III: 7341758-7341976 Caenorhabditis elegans
Exon95084   125   III: 7342063-7342187 Caenorhabditis elegans
Exon95087   203   III: 7342234-7342436 Caenorhabditis elegans
Exon95090   68   III: 7342823-7342890 Caenorhabditis elegans
Exon95093   201   III: 7342938-7343138 Caenorhabditis elegans
Exon95097   199   III: 7343469-7343667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3a.1 7338835 7343667 1

1 Sequence

Length
2335

1 Sequence Ontology Term

Identifier Name Description
transcript