WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08F8.3a Sequence Name  F08F8.3a
Length (nt)  2133   Chromosome Location  III: 7339001-7339070
Chromosome . Primary Identifier  III Chromosome Location . Start  7339001
Chromosome Location . End  7339070
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54188 KAP-1, isoform a 80.1 710 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044028
WBRNAi00012913
WBRNAi00005204

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08F8.3a 7339001 7339070 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002182 kap-1 F08F8.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08F8.3a 7339001 7339070 1
CDS:F08F8.3a 7339135 7339207 1
CDS:F08F8.3a 7339654 7339891 1
CDS:F08F8.3a 7340247 7340358 1
CDS:F08F8.3a 7340451 7340587 1
CDS:F08F8.3a 7340650 7340788 1
CDS:F08F8.3a 7340835 7340922 1
CDS:F08F8.3a 7341053 7341407 1
CDS:F08F8.3a 7341758 7341976 1
CDS:F08F8.3a 7342063 7342187 1
CDS:F08F8.3a 7342234 7342436 1
CDS:F08F8.3a 7342823 7342890 1
CDS:F08F8.3a 7342938 7343138 1
CDS:F08F8.3a 7343469 7343573 1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08F8.3a.1 F08F8.3a.1 2335   III: 7338835-7343667
Transcript:F08F8.3a.2 F08F8.3a.2 2234   III: 7338994-7343667