WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F8.3a.2 Sequence Name  F08F8.3a.2
Length (nt)  2234   Chromosome Location  III: 7338994-7343667
Chromosome . Primary Identifier  III Chromosome Location . Start  7338994
Chromosome Location . End  7343667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002182 kap-1 F08F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.3a F08F8.3a 2133   III: 7339001-7339070

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3a.2 7338994 7343667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95057   77   III: 7338994-7339070 Caenorhabditis elegans
Exon95061   73   III: 7339135-7339207 Caenorhabditis elegans
Exon95064   238   III: 7339654-7339891 Caenorhabditis elegans
Exon95067   112   III: 7340247-7340358 Caenorhabditis elegans
Exon95070   137   III: 7340451-7340587 Caenorhabditis elegans
Exon95073   139   III: 7340650-7340788 Caenorhabditis elegans
Exon95076   88   III: 7340835-7340922 Caenorhabditis elegans
Exon95079   355   III: 7341053-7341407 Caenorhabditis elegans
Exon95082   219   III: 7341758-7341976 Caenorhabditis elegans
Exon95085   125   III: 7342063-7342187 Caenorhabditis elegans
Exon95088   203   III: 7342234-7342436 Caenorhabditis elegans
Exon95091   68   III: 7342823-7342890 Caenorhabditis elegans
Exon95094   201   III: 7342938-7343138 Caenorhabditis elegans
Exon95098   199   III: 7343469-7343667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3a.2 7338994 7343667 1

1 Sequence

Length
2234

1 Sequence Ontology Term

Identifier Name Description
transcript