WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1C.2 Sequence Name  Y39A1C.2
Length (nt)  3201   Chromosome Location  III: 10858313-10858458
Chromosome . Primary Identifier  III Chromosome Location . Start  10858313
Chromosome Location . End  10858458
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1C.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19147 OXI-1 120.9 1066 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00094649
WBRNAi00103054
WBRNAi00056128
WBRNAi00020352
WBRNAi00076775
WBRNAi00006104
WBRNAi00084277

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1C.2 10858313 10858458 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003898 oxi-1 Y39A1C.2 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1C.2 10858313 10858458 1
CDS:Y39A1C.2 10859112 10859244 1
CDS:Y39A1C.2 10859748 10860089 1
CDS:Y39A1C.2 10860634 10861013 1
CDS:Y39A1C.2 10861728 10861987 1
CDS:Y39A1C.2 10862123 10862397 1
CDS:Y39A1C.2 10862553 10862644 1
CDS:Y39A1C.2 10862772 10862890 1
CDS:Y39A1C.2 10863218 10863338 1
CDS:Y39A1C.2 10864103 10864506 1
CDS:Y39A1C.2 10865295 10865643 1
CDS:Y39A1C.2 10866236 10866394 1
CDS:Y39A1C.2 10866446 10866866 1

1 Sequence

Length
3201

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1C.2.1 Y39A1C.2.1 3310   III: 10858284-10866946