WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48A6B.13t Sequence Name  Y48A6B.13t
Length (nt)  1668   Chromosome Location  III: 11051953-11052057
Chromosome . Primary Identifier  III Chromosome Location . Start  11051953
Chromosome Location . End  11052057
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.13t

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54444 SPAT-2, isoform t 60.1 555 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056860
WBRNAi00020724
WBRNAi00006357
WBRNAi00037216
WBRNAi00077110

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48A6B.13t 11051953 11052057 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012973 spat-2 Y48A6B.13 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48A6B.13t 11051953 11052057 1
CDS:Y48A6B.13t 11052815 11052941 1
CDS:Y48A6B.13t 11056000 11056276 1
CDS:Y48A6B.13t 11057284 11057395 1
CDS:Y48A6B.13t 11057920 11058447 1
CDS:Y48A6B.13t 11058866 11059085 1
CDS:Y48A6B.13t 11060702 11060968 1
CDS:Y48A6B.13t 11061810 11061841 1

1 Sequence

Length
1668

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48A6B.13t.1 Y48A6B.13t.1 1802   III: 11051949-11061971