WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49E10.11c Sequence Name  Y49E10.11c
Length (nt)  3579   Chromosome Location  III: 12401682-12402063
Chromosome . Primary Identifier  III Chromosome Location . Start  12401682
Chromosome Location . End  12402063
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.11c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44010 TAT-1, isoform c 134.4 1192 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00097558
WBRNAi00057005
WBRNAi00078010
WBRNAi00006804
WBRNAi00097530
WBRNAi00097531
WBRNAi00037286
WBRNAi00097554
WBRNAi00097557
WBRNAi00077999
WBRNAi00078000
WBRNAi00097549
WBRNAi00097548
WBRNAi00097551
WBRNAi00097550
WBRNAi00097553
WBRNAi00097552
WBRNAi00077712
WBRNAi00077718
WBRNAi00077721
WBRNAi00099120

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.11c 12401682 12402063 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013034 tat-1 Y49E10.11 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.11c 12401682 12402063 -1
CDS:Y49E10.11c 12404785 12404877 -1
CDS:Y49E10.11c 12405722 12405978 -1
CDS:Y49E10.11c 12407302 12407442 -1
CDS:Y49E10.11c 12407652 12407785 -1
CDS:Y49E10.11c 12407928 12408082 -1
CDS:Y49E10.11c 12409690 12410219 -1
CDS:Y49E10.11c 12412124 12412662 -1
CDS:Y49E10.11c 12413753 12414053 -1
CDS:Y49E10.11c 12414860 12414972 -1
CDS:Y49E10.11c 12415563 12415802 -1
CDS:Y49E10.11c 12417470 12417776 -1
CDS:Y49E10.11c 12418846 12419031 -1
CDS:Y49E10.11c 12420074 12420173 -1
CDS:Y49E10.11c 12420224 12420281 -1
CDS:Y49E10.11c 12420622 12420664 -1

1 Sequence

Length
3579

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49E10.11c.1 Y49E10.11c.1 4705   III: 12398901-12421570